05/19/2026 updated
100 % available
Bioinformatik und Data Consultant
Lund, Sweden
Worldwide
PhD Medical Science, MSc Bioinformatics, BSc Scientific ProgrammingDNA SequencingBioinformaticsBiostatisticsMedical ResearchBiomedical SciencesBioMedicineGenomicsMedical StatisticsSciPySQL DatabasesData ScienceCancer ResearchScikit Learn
Softwareentwicklung / Data Science:
- Programmiersprachen (Python, R, C, Perl, Java)
- Data Science in Python (Pandas, NumPy, SciPy, Polars, scikit-learn) and R (Tidyverse, Shiny)
- Machine Learning / KI / AI (scikit-learn, caret)
- Softwareentwicklung und DevOps (git, Subversion, CI, Docker. Container, Conda)
- High Performance Computing / Cloud Computing (Amazon AWS, Slurm, SGE/OGE, etc)
- Datenbanken (SQL / NoSQL)
- Open Source Software Entwicklung
Bioinformatik:
- NGS, Genomik. Transkriptomik, und andere -omik Experimente
- Multi-omics
- Klinische Bioinformatik und Datenanalyse (klinische Studien)
- Workflow Entwicklung (Snakemake / Nextflow, Conda, Container)
- Statistik
- Programmiersprachen (Python, R, C, Perl, Java)
- Data Science in Python (Pandas, NumPy, SciPy, Polars, scikit-learn) and R (Tidyverse, Shiny)
- Machine Learning / KI / AI (scikit-learn, caret)
- Softwareentwicklung und DevOps (git, Subversion, CI, Docker. Container, Conda)
- High Performance Computing / Cloud Computing (Amazon AWS, Slurm, SGE/OGE, etc)
- Datenbanken (SQL / NoSQL)
- Open Source Software Entwicklung
Bioinformatik:
- NGS, Genomik. Transkriptomik, und andere -omik Experimente
- Multi-omics
- Klinische Bioinformatik und Datenanalyse (klinische Studien)
- Workflow Entwicklung (Snakemake / Nextflow, Conda, Container)
- Statistik
Languages
GermanNative speakerEnglishFluentSwedishBasic knowledge
Project history
{ Leading Bioinformatics, Data Science, and IT for a cancer diagnostics, genomics, and liquid
biopsy company.
{ Hiring, technical management, and mentoring of the bioinformatics team.
{ Development of computational pipelines and automation for ctDNA liquid biopsy diagnostics
based on high-throughput sequencing and digital PCR.
{ Processing of customer and R&D sequencing data using HPC and cloud infrastructure.
{ Planning, implementation, and administration of computing infrastructure for a diagnostic
start-up company.
{ Contribution to the intellectual property strategy, including two patent applications.
{ Contribution to successful ISO 13485/17025 accreditation including writing of documentation
and SOPs, and participation in audits.
biopsy company.
{ Hiring, technical management, and mentoring of the bioinformatics team.
{ Development of computational pipelines and automation for ctDNA liquid biopsy diagnostics
based on high-throughput sequencing and digital PCR.
{ Processing of customer and R&D sequencing data using HPC and cloud infrastructure.
{ Planning, implementation, and administration of computing infrastructure for a diagnostic
start-up company.
{ Contribution to the intellectual property strategy, including two patent applications.
{ Contribution to successful ISO 13485/17025 accreditation including writing of documentation
and SOPs, and participation in audits.
{ Development of expression signatures using RNA-seq and machine learning.
{ Large-scale processing and analysis of thousands of high-throughput sequencing datasets.
{ Detection, filtering, and analysis of somatic mutations from tumor DNA/RNA-seq datasets.
{ Detection and analysis of chromosomal rearrangements from WGS data.
{ Development of resources for a large-scale RNA-seq study and validation against matched
microarray data.
{ Data integration and multi-omics.
{ Data and project management.
{ Large-scale processing and analysis of thousands of high-throughput sequencing datasets.
{ Detection, filtering, and analysis of somatic mutations from tumor DNA/RNA-seq datasets.
{ Detection and analysis of chromosomal rearrangements from WGS data.
{ Development of resources for a large-scale RNA-seq study and validation against matched
microarray data.
{ Data integration and multi-omics.
{ Data and project management.